List of All UM-BBD Microorganisms

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Organisms shown here are known to initiate a UM-BBD biodegradation pathway. Other organisms not listed here may also initiate these or similar pathways or carry out later steps.

This is a searchable page. You can search on microorganism names. You can use the Boolean operators AND OR or NOT (e.g., Pseudomonas AND ADP).

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Additional information on an organism's taxonomy and genes and proteins can be found in the National Center for Biotechnology Information (NCBI) Taxonomy Database.

As of April 19, 2014 4:27:16 AM CDT , the UM-BBD contains 543 entries for microorganism strains.

Microorganism Name UM-BBD Pathway
Acetobacterium sp. LuTria 3Triethanolamine Pathway
Acetobacterium woodii Carbon Tetrachloride (anaerobic) Pathway
Achromobacter xylosoxidans sp. xylosoxidansImidosuccinate Pathway
Achromobacter xylosoxidans subsp. denitrificans NTB-12,4-Dichlorobenzoate Pathway
Acinetobacter calcoaceticus 3-Fluorobenzoate Pathway
Acinetobacter sp. BEM22-Chloro-N-isopropylacetanilide Pathway
Acinetobacter sp. NCIB 9871Cyclohexane Pathway
Actinomycetes spp.Trinitrotoluene Pathway
Aeromonas sp. s45p1Phenanthrene Pathway
Agaricus bisporus 4-Carboxy-4'-Sulfoazobenzene Pathway
Agrobacterium sp. J14aAtrazine Pathway
Agrobacterium radiobacter Dimethylphosphinate Pathway
Agrobacterium radiobacter Glyphosate Pathway
Agrobacterium radiobacter AD1(pTB3) 1,2,3-Tribromopropane Pathway
Agrobacterium sp. 35S4-Hydroxypyridine Pathway
Agrobacterium tumefaciens BY6 Imidosuccinate Pathway
Alcaligenes eutrophus 2,4-Dichlorophenoxyacetic Acid Pathway
Alcaligenes eutrophus 335 4-Fluorobenzoate (an/aerobic) Pathway
Alcaligenes eutrophus JMP134 4-Fluorobenzoate (an/aerobic) Pathway
Alcaligenes sp. AL30072,4-Dichlorobenzoate Pathway
Alcaligenes sp. NyZ215Nitrophenol Family (an/aerobic) Pathway
Alcaligenes sp. O-12-Aminobenzenesulfonate Pathway
Alcaligenes sp. O-1Toluene-4-sulfonate Pathway
Alcaligenes sp. SG1Atrazine Pathway
Aminobacter sp. O-1Dichlobenil Pathway
Anabaena sp. PCC7120gamma-1,2,3,4,5,6-Hexachlorocyclohexane Pathway
Ancylobacter aquaticus AD20 1,2-Dichloroethane Pathway
Ancylobacter aquaticus AD25 1,2-Dichloroethane Pathway
Ancylobacter aquaticus AD27 1,2-Dichloroethane Pathway
Anthracobia melaloma 1,5-Anhydro-D-fructose (Fungal) Pathway
Aquamicrobium defluvii NKK Thiophene-2-carboxylate Pathway
Aquaspirillum sp. 2C2,4-Dichloroaniline Pathway
Aromatoleum aromaticum EbN1 Ethylbenzene (anaerobic) Pathway
Arthrobacter atrocyaneus Glyphosate Pathway
Arthrobacter aurescens TC1 Atrazine Pathway
Arthrobacter ilicis Methyl tert-butyl ether Pathway
Arthrobacter keyseri 12B Phthalate Family Pathway
Arthrobacter nicotinovorans (pAO1) Nicotine Pathway
Arthrobacter nitroguajacolicus Ru61a Quinaldine Pathway
Arthrobacter oxydans Nicotine Pathway
Arthrobacter protophormiae RKJ100 Nitrophenol Family (an/aerobic) Pathway
Arthrobacter sp.Organosilicone (an/aerobic) Pathway
Arthrobacter sp.2,4-Dichlorophenoxyacetic Acid Pathway
Arthrobacter sp.Tyrosine Pathway
Arthrobacter sp. 4-CB12,4-Dichlorobenzoate Pathway
Arthrobacter sp. AD21,3-Dichloro-2-propanol Pathway
Arthrobacter sp. CR-7Pyridoxine Pathway
Arthrobacter sp. DSM 20389Metamitron Pathway
Arthrobacter sp. F101Fluorene Pathway
Arthrobacter sp. JS443Nitrophenol Family (an/aerobic) Pathway
Arthrobacter sp. KWEndosulfan Pathway
Arthrobacter sp. MA6Iprodione Pathway
Arthrobacter sp. Py1 (DSM 6386)Pyrrole-2-carboxylate Pathway
Arthrobacter sp. Ru61aVanillin Pathway
Arthrobacter sp. SU2,4-Dichlorobenzoate Pathway
Arxula adeninivorans Limonene Pathway
Aspergillus cellulosae Limonene Pathway
Aspergillus flavus Quercetin Pathway
Aspergillus niger Benzoate Pathway
Aspergillus niger 2-Aminobenzoate Pathway
Aspergillus niger Quercetin Pathway
Aspergillus niger Carbofuran Pathway
Aspergillus niger 1,5-Anhydro-D-fructose (Fungal) Pathway
Aspergillus niger ATCC 6275 Phenanthrene (fungal 9R,10R) Pathway
Aspergillus niger J/8 Diazepam Pathway
Aspergillus tamarii Caffeine (fungal) Pathway
Azoarcus sp. TToluene (anaerobic) Pathway
Azoarcus evansii Benzoate (anaerobic) Pathway
Azoarcus evansii Benzoate Pathway
Azotobacter chroococcum 2,4-Dichlorophenoxyacetic Acid Pathway
Azotobacter vinelandii Thiocyanate Pathway
Bacillus arseniciselenatis E-1H Selenate Pathway
Bacillus brevis Isoniazid Pathway
Bacillus halodurans Thiamin Pathway
Bacillus megaterium PYR2910 Pyrrole-2-carboxylate Pathway
Bacillus pallidus alpha-Pinene Pathway
Bacillus sp.Trinitrotoluene Pathway
Bacillus sp. OxB-1Z-Phenylacetaldoxime Pathway
Bacillus spp.Isoniazid Pathway
Bacillus stearothermophilus Limonene Pathway
Beijerinckia sp.Acenaphthylene Pathway
Bjerkandera sp. BOS55Anthracene (fungal) Pathway
Bradyrhizobium japonicum Nitrate (anaerobic) Pathway
Brevibacterium fuscum Nitrobenzene Pathway
Brevibacterium sp. DPO 1361Dibenzofuran Pathway
Brevundimonas diminuta INMI KS-7 2,4-Dichloroaniline Pathway
Brevundimonas diminuta MG Parathion (an/aerobic) Pathway
Burkholderia cepacia Endosulfan Pathway
Burkholderia cepacia Phthalate Family Pathway
Burkholderia cepacia 2,4-Dichlorophenoxyacetic Acid Pathway
Burkholderia cepacia 4-Fluorobenzoate (an/aerobic) Pathway
Burkholderia cepacia 2CBS Benzoate Pathway
Burkholderia cepacia AC1100 Pentachlorophenol Family Pathway
Burkholderia cepacia AC1100 2,4,5-Trichlorophenoxyacetic Acid Pathway
Burkholderia cepacia CAA1 3-Chloroacrylic Acid Pathway
Burkholderia cepacia CAA2 3-Chloroacrylic Acid Pathway
Burkholderia cepacia G4 Toluene Pathway
Burkholderia cepacia G4 Trichloroethylene Pathway
Burkholderia cepacia MB2 o-Xylene Pathway
Burkholderia cepacia R34 2,4-Dinitrotoluene Pathway
Burkholderia sp. P511,2,4-Trichlorobenzene (an/aerobic) Pathway
Burkholderia sp. PS121,2,4-Trichlorobenzene (an/aerobic) Pathway
Burkholderia sp. strain JS1653-Nitrotyrosine Family Pathway
Candida parapsilosis CBS604 Nitrophenol Family (an/aerobic) Pathway
Chelatobacter heintzii ATCC 29600 Nitrilotriacetate (an/aerobic) Pathway
Citrobacter sp. N14Uranium Pathway
Cladosporium sp.Limonene Pathway
Clavibacter michiganense subsp. sepedonicum KZ-42,4-Dichlorobenzoate Pathway
Clavibacter sp.Atrazine Pathway
Clostridium acetobutylicumW/Z-1T 2,4,6-Trinitrotoluene (anaerobic) Pathway
Clostridium bifermentans ATCC 638 2,4,6-Trinitrotoluene (anaerobic) Pathway
Clostridium bifermentans KMR-1 2,4,6-Trinitrotoluene (anaerobic) Pathway
Clostridium hydroxybenzoicum JW/Z-1T Phenol (anaerobic) Pathway
Clostridium pasteurianum 2,4,6-Trinitrotoluene (anaerobic) Pathway
Clostridium sordellii ATCC 9714 2,4,6-Trinitrotoluene (anaerobic) Pathway
Clostridium sporogenes ATCC 11437 2,4,6-Trinitrotoluene (anaerobic) Pathway
Clostridium thermoaceticum Carbon Tetrachloride (anaerobic) Pathway
Comamonas testosteroni 63 3-Methylquinoline Pathway
Comamonas testosteroni I-2 2,4-Dichloroaniline Pathway
Comamonas testosteroni JH5 2,4-Dichlorophenoxyacetic Acid Pathway
Comamonas testosteroni KF-1 3-(4-Sulfophenyl)butyrate Pathway
Comamonas testosteroni NH1000 Phthalate Family Pathway
Comamonas testosteroni T-2 Toluene-4-sulfonate Pathway
Comamonas testosteroni TA441 Testosterone Pathway
Comamonas testosteroni YZW-D Phthalate Family Pathway
Cordyceps sinensis 1,4-Dioxane Pathway
Coriolus versicolor Nitrofen Pathway
Corynebacterium sp. C125Tetralin Pathway
Corynebacterium sp. N-10741,3-Dichloro-2-propanol Pathway
Corynebacterium sp. SO1A2-Mercaptobenzothiazole Pathway
Cunninghamella elegans Phenanthrene (fungal 9S,10S) Pathway
Cunninghamella elegans ATCC 9245 Phenanthrene (fungal 9R,10R) Pathway
Curtobacterium sp.Asulam Pathway
Dehalobacter restrictus Tetrachloroethene (anaerobic) Pathway
Dehalobacter sp.beta-1,2,3,4,5,6-Hexachlorocyclohexane (an/aerobic) Pathway
Dehalococcoides ethenogenes 195 Tetrachloroethene (anaerobic) Pathway
Dehalospirillum multivorans Tetrachloroethene (anaerobic) Pathway
Deinococcus radiodurans R1 Uranium Pathway
Delftia acidovorans CA 28 2,4-Dichloroaniline Pathway
Delftia sp. AN3Nitrobenzene Pathway
Desulfitobacterium sp. PCE-STetrachloroethene (anaerobic) Pathway
Desulfobacterium autotrophicum Carbon Tetrachloride (anaerobic) Pathway
Desulfovibrio desulfuricans Osmium Reduction Pathway
Desulfovibrio sp.2,4,6-Trinitrotoluene (anaerobic) Pathway
Desulfovibrio sp. TBP1Tetrabromobisphenol A Pathway
Desulfovibrio vulgaris Uranium Pathway
Diaphorobacter sp. TPD-1Triazophos Pathway
Diatoms bacillariophyta Tri-n-butyltin Pathway
Dinoflagellates pyrrhophyta Tri-n-butyltin Pathway
Enterobacter aerogenes Glyphosate Pathway
Enterobacter aerogenes 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway
Enterobacter cloacae Pentaerythritol tetranitrate Pathway
Escherichia coli Carbazole Pathway
Escherichia coli N-Methylmorpholine-N-oxide Pathway
Escherichia coli Arsonoacetate Pathway
Escherichia coli Methionine and Threonine Pathway
Escherichia coli Nitrate (anaerobic) Pathway
Escherichia coli 2,4,6-Trinitrotoluene (anaerobic) Pathway
Escherichia coli C600 Starch Oligomer Pathway
Escherichia coli HB101 2-Mercaptobenzothiazole Pathway
Escherichia coli J53-1 Organomercury Pathway
Escherichia coli K-12 3-Nitrotyrosine Family Pathway
Escherichia coli K-12 Thiophene-2-carboxylate Pathway
Escherichia coli K-12 3-Phenylpropionate Pathway
Escherichia coli K-12 Cinnamate Pathway
Eubacterium oxidoreducens Gallate (anaerobic) Pathway
Exophiala jeanselmei Styrene Pathway
Flavobacterium sp.Parathion (an/aerobic) Pathway
Flavobacterium sp.Glyphosate Pathway
Flavobacterium sp.Asulam Pathway
Flavobacterium sp.Thiophene-2-carboxylate Pathway
Flavobacterium sp.2,4-Dichlorophenoxyacetic Acid Pathway
Flavobacterium sp.Bromoxynil (an/aerobic) Pathway
Flavobacterium sp. ATCC 27551Parathion (an/aerobic) Pathway
Flavobacterium sp. ATCC 39723Pentachlorophenol Family Pathway
Fusarium graminearum Carbofuran Pathway
Fusarium oxysporum 2-Nitropropane Pathway
Fusarium oxysporum Quercetin Pathway
Fusarium oxysporum Organosilicone (an/aerobic) Pathway
Geobacter sulfurreducens Technetium Immobilization Pathway
Gordona sp. strain 213EBenzothiophene Desulfurization Pathway
Hormonema sp.Limonene Pathway
Hydrogenophaga palleroni 4-Carboxy-4'-Sulfoazobenzene Pathway
Hydrogenophaga palleronii 2,4-Dinitrotoluene Pathway
Hydrogenophaga palleronii S5 Nitrobenzene Pathway
Hyphomicrobium sp. DM2Dichloromethane Pathway
Hyphomicrobium sp. EGDimethyl Sulfoxide & Organosulfide Cycle Pathway
Hyphomicrobium sp. SDimethyl Sulfoxide & Organosulfide Cycle Pathway
Klebsiella oxytoca Sc Dimethylisophthalate Pathway
Klebsiella pneumoniae Bromoxynil (an/aerobic) Pathway
Klebsiella pneumoniae Benzonitrile Pathway
Klebsiella pneumoniae NCIB 12204 Acetylene Pathway
Klebsiella pneumoniae subsp.1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway
Klebsiella spp.Caffeine Pathway
Kuenenia stuttgartiensis Nitrate (anaerobic) Pathway
Lactobacillus acidophilus 2,4,6-Trinitrotoluene (anaerobic) Pathway
Lactobacillus casei 2,4,6-Trinitrotoluene (anaerobic) Pathway
Lactobacillus delbrueckii 2,4,6-Trinitrotoluene (anaerobic) Pathway
Listeria monocytogenes Fosfomycin Pathway
Mesorhizobium loti Pyridoxine Pathway
Methanobacterium thermoautotrophicum Methanogenesis Pathway
Methanobacterium thermoautotrophicum Carbon Tetrachloride (anaerobic) Pathway
Methanosarcina barkeri Carbon Tetrachloride (anaerobic) Pathway
Methanosarcina thermophila Tetrachloroethene (anaerobic) Pathway
Methylobacterium mesophilicum Methyl tert-butyl ether Pathway
Methylobacterium sp. DM4Dichloromethane Pathway
Methylococcus capsulatus Thiocyanate Pathway
Methylophilus sp. DM11Dichloromethane Pathway
Methylosinus trichosporium OB3b N-Nitrosodimethylamine Pathway
Methylosinus trichosporium OB3b Trichloroethylene Pathway
Microbacterium luteolum YK-1 Pyridoxine Pathway
Moorella thermoacetica 2,4,6-Trinitrotoluene (anaerobic) Pathway
Moraxella sp.Nitrophenol Family (an/aerobic) Pathway
Moraxella sp. ASL4Naphthalenesulfonate Family Pathway
Moraxella sp. DAK32-Chloro-N-isopropylacetanilide Pathway
Moraxella sp. GNitrobenzene Pathway
Moraxella sp. G2,4-Dichloroaniline Pathway
Morchella costata 1,5-Anhydro-D-fructose (Fungal) Pathway
Morchella vulgaris 1,5-Anhydro-D-fructose (Fungal) Pathway
Mycobacterium aurum M01 Morpholine Pathway
Mycobacterium austroafricanum IFP 2012 Methyl tert-butyl ether Pathway
Mycobacterium austroafricanum IFP 2173 Isooctane Pathway
Mycobacterium bovis BCG 1173P2 Isoniazid Pathway
Mycobacterium fortuitum Isoniazid Pathway
Mycobacterium phlei WU-0103 Benzothiophene Desulfurization Pathway
Mycobacterium smegmatis Isoniazid Pathway
Mycobacterium sp. ESDEndosulfan Pathway
Mycobacterium sp.RJGII-135Benzo[a]pyrene Pathway
Mycobacterium tuberculosis Thiobenzamide Pathway
Mycobacterium tuberculosis Isoniazid Pathway
Mycobacterium tuberculosis H37Rv Isoniazid Pathway
Mycobacterium vaccae JOB-5 N-Nitrosodimethylamine Pathway
Mycobacterium vaccae JOB5 Methyl tert-butyl ether Pathway
Mycobacterium vanbaalenii PYR-1 Anthracene Pathway
Mycobacterium vanbaalenii PYR-1 Pyrene Pathway
Mycobacterium vanbaalenii PYR-1 Benzo[a]pyrene Pathway
Mycobacterium vanbaalenii PYR-1 Phthalate Family Pathway
Myrothecium verrucaria Cyanamide Pathway
Neurospora crassa 2-Nitropropane Pathway
Nitrosomonas europaea Methyl fluoride Pathway
Nitrosomonas europaea Dimethyl ether Pathway
Nocardia sp.alpha-Pinene Pathway
Nocardia sp. B-1Parathion (an/aerobic) Pathway
Nocardia sp. ENV425Methyl tert-butyl ether Pathway
Nocardia sp. LSU-169Methyl ethyl ketone Pathway
Nocardia sp. TW2Parathion (an/aerobic) Pathway
Nocardioides sp. SG-4GBenomyl Pathway
Nostoc ellipsosporum gamma-1,2,3,4,5,6-Hexachlorocyclohexane Pathway
Novosphingobium sp. FND-3Carbofuran Pathway
Ochrobactrum anthropi 2,4-Dinitrotoluene Pathway
Paenibacillus sp. strain A11-2Benzothiophene Desulfurization Pathway
Paracoccus denitrificans 3-Fluorobenzoate Pathway
Paracoccus denitrificans Thiocyanate Pathway
Paracoccus denitrificans Nitrate (anaerobic) Pathway
Paracoccus denitrificans 3CA 2,4-Dichloroaniline Pathway
Pelobacter acetylenicus Acetylene Pathway
Penicillium commune Caffeine (fungal) Pathway
Penicillium digitatum Limonene Pathway
Penicillium simplicissimum Vanillin Pathway
Penicillium velutinum Diazepam Pathway
Peziza ostracoderma 1,5-Anhydro-D-fructose (Fungal) Pathway
Phanerochaete chrysosporium Anthracene (fungal) Pathway
Phanerochaete chrysosporium ATCC 24725 Phenanthrene (fungal 9S,10S) Pathway
Phanerochaete chrysosporium ATCC 34541 Phenanthrene (fungal 9S,10S) Pathway
Pleurotus ostreatus Anthracene (fungal) Pathway
Pleurotus ostreatus Phenanthrene (fungal 9R,10R) Pathway
Proteobacteria alpha subclass M2 Methanesulfonic Acid Pathway
Proteobacteria gamma subclass Nitrilotriacetate (an/aerobic) Pathway
Proteobacteria sp. EB1Ethylbenzene (anaerobic) Pathway
Proteus vulgaris 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway
Pseudomonas acidovorans M3GY 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) Pathway
Pseudomonas aeruginosa Benzoate Pathway
Pseudomonas aeruginosa Caprolactam Pathway
Pseudomonas aeruginosa Branched Chain Dodecylbenzene Sulfonate Pathway
Pseudomonas aeruginosa Fosfomycin Pathway
Pseudomonas aeruginosa Citronellol Pathway
Pseudomonas aeruginosa Endosulfan Pathway
Pseudomonas aeruginosa Isoniazid Pathway
Pseudomonas aeruginosa Thiocyanate Pathway
Pseudomonas aeruginosa Geraniol Pathway
Pseudomonas aeruginosa 2,4-Dinitrotoluene Pathway
Pseudomonas aeruginosa ATCC 15692 Triphenyltin Pathway
Pseudomonas aeruginosa MAO1 Trinitrotoluene Pathway
Pseudomonas aeruginosa PA012 Isoniazid Pathway
Pseudomonas alcaligenes N-Oleoyl-N-methyltaurine Pathway
Pseudomonas alcaligenes NCIB 9867 m-Cresol Pathway
Pseudomonas aureofaciens 2-Aminobenzoate Pathway
Pseudomonas cepacia Phthalate Family Pathway
Pseudomonas cepacia P166 2,4-Dichlorophenoxyacetic Acid Pathway
Pseudomonas chlororaphis ATCC 9446 Triphenyltin Pathway
Pseudomonas chlororaphis B23 Acrylonitrile Pathway
Pseudomonas chlororaphis CNR15 Triphenyltin Pathway
Pseudomonas chlororaphis RW71 Tetrachlorobenzene Pathway
Pseudomonas cichorii 170 3-Chloroacrylic Acid Pathway
Pseudomonas cichorii 170 1,3-Dichloropropene Pathway
Pseudomonas citronellolis Geraniol Pathway
Pseudomonas citronellolis Citronellol Pathway
Pseudomonas fluorescens Organomercury Pathway
Pseudomonas fluorescens Trinitrotoluene Pathway
Pseudomonas fluorescens alpha-Pinene Pathway
Pseudomonas fluorescens ACB 4-Hydroxyacetophenone Pathway
Pseudomonas fluorescens ATCC 13525 Triphenyltin Pathway
Pseudomonas fluorescens I-C Nitroglycerin Pathway
Pseudomonas gladioli Limonene Pathway
Pseudomonas mendocina Citronellol Pathway
Pseudomonas mendocina Geraniol Pathway
Pseudomonas mendocina KR1 N-Nitrosodimethylamine Pathway
Pseudomonas mendocina KR1 Toluene Pathway
Pseudomonas mendocina pTOL Toluene Pathway
Pseudomonas mendocina pWWO Toluene Pathway
Pseudomonas oleovorans n-Octane Pathway
Pseudomonas oleovorans Dodecyl sulfate Pathway
Pseudomonas pickettii PK01 Toluene Pathway
Pseudomonas pseudoalcaligenes JS45 Nitrobenzene Pathway
Pseudomonas pseudoalcaligenes JS52 Trinitrotoluene Pathway
Pseudomonas pseudoalcaligenes KF707 4-Chlorobiphenyl Pathway
Pseudomonas putida Caffeine Pathway
Pseudomonas putida Orcinol Pathway
Pseudomonas putida p-Xylene Pathway
Pseudomonas putida Methionine and Threonine Pathway
Pseudomonas putida Vanillin Pathway
Pseudomonas putida Toluene Pathway
Pseudomonas putida Limonene Pathway
Pseudomonas putida Dibenzothiophene Degradation Pathway
Pseudomonas putida Bromoxynil (an/aerobic) Pathway
Pseudomonas putida Benzoate Pathway
Pseudomonas putida alpha-Pinene Pathway
Pseudomonas putida Nitrophenol Family (an/aerobic) Pathway
Pseudomonas putida 39/D Ethylbenzene Pathway
Pseudomonas putida ATCC 12633 Mandelate Pathway
Pseudomonas putida ATCC 17453 (+)-Camphor Pathway
Pseudomonas putida CA-3 Styrene Pathway
Pseudomonas putida CAM Methyl tert-butyl ether Pathway
Pseudomonas putida CBB5 Caffeine (fungal) Pathway
Pseudomonas putida CSV86 1-Methylnaphthalene Pathway
Pseudomonas putida CSV86 2-Methylnaphthalene Pathway
Pseudomonas putida DTB N,N-Diethyl-m-toluamide Pathway
Pseudomonas putida F1 Trichloroethylene Pathway
Pseudomonas putida F1 Toluene Pathway
Pseudomonas putida F1 p-Cymene Pathway
Pseudomonas putida Fu1 Furfural Pathway
Pseudomonas putida II-B Nitroglycerin Pathway
Pseudomonas putida JD1 4-Hydroxyacetophenone Pathway
Pseudomonas putida mt-2 m-Xylene Pathway
Pseudomonas putida mt-2 Nitrobenzene Pathway
Pseudomonas putida mt-2 Toluene Pathway
Pseudomonas putida N19-2 N-Cyclohexylisocyanide Pathway
Pseudomonas putida NCIB 9869 m-Cresol Pathway
Pseudomonas putida PgG 786 Tetralin Pathway
Pseudomonas putida PL p-Cymene Pathway
Pseudomonas putida PpG1 (ATCC 17453) Adamantanone Pathway
Pseudomonas putida S-313 Toluene-4-sulfonate Pathway
Pseudomonas rhodesiae KK1 Anthracene Pathway
Pseudomonas savastanoi Trinitrotoluene Pathway
Pseudomonas sp.2,4-Dichloroaniline Pathway
Pseudomonas sp.Limonene Pathway
Pseudomonas sp.1,4-Dichlorobenzene Pathway
Pseudomonas sp.Dimethyl Sulfoxide & Organosulfide Cycle Pathway
Pseudomonas sp.Dichloromethane Pathway
Pseudomonas sp.2-Aminobenzoate Pathway
Pseudomonas sp.Asulam Pathway
Pseudomonas sp. (pBS1001)Caprolactam Pathway
Pseudomonas sp. 192Atrazine Pathway
Pseudomonas sp. 194Atrazine Pathway
Pseudomonas sp. 50432Carbofuran Pathway
Pseudomonas sp. AN-Cyclopropylmelamine Pathway
Pseudomonas sp. A 2NT-Trinitrotoluene Pathway
Pseudomonas sp. A2279Acenaphthylene Pathway
Pseudomonas sp. A3Naphthalenesulfonate Family Pathway
Pseudomonas sp. ACP1-Aminocyclopropane-1-carboxylate Pathway
Pseudomonas sp. ADPAtrazine Pathway
Pseudomonas sp. B1Hexadecyltrimethylammonium Chloride Pathway
Pseudomonas sp. B133-Fluorobenzoate Pathway
Pseudomonas sp. B134-Fluorobenzoate (an/aerobic) Pathway
Pseudomonas sp. BCAcenaphthylene Pathway
Pseudomonas sp. BN6Mordant Yellow 3 Pathway
Pseudomonas sp. BN9Mordant Yellow 3 Pathway
Pseudomonas sp. BRAcenaphthylene Pathway
Pseudomonas sp. C22Naphthalenesulfonate Family Pathway
Pseudomonas sp. C4, C5 and C6Carbaryl Pathway
Pseudomonas sp. CA10Carbazole Pathway
Pseudomonas sp. CBS3Tyrosine Pathway
Pseudomonas sp. CBS32,4-Dichlorobenzoate Pathway
Pseudomonas sp. CBWBenomyl Pathway
Pseudomonas sp. CPE2Benzoate Pathway
Pseudomonas sp. FB10242-Mercaptobenzothiazole Pathway
Pseudomonas sp. GCH12-Chloro-N-isopropylacetanilide Pathway
Pseudomonas sp. IAPyridoxine Pathway
Pseudomonas sp. JL22,4-Dichloroaniline Pathway
Pseudomonas sp. JS150Chlorobenzene Pathway
Pseudomonas sp. JS6Chlorobenzene Pathway
Pseudomonas sp. JTS-0006Nicotine Pathway
Pseudomonas sp. K 1722-Aminobenzoate (anaerobic) Pathway
Pseudomonas sp. KB 7402-Aminobenzoate (anaerobic) Pathway
Pseudomonas sp. KB 7402-Aminobenzoate Pathway
Pseudomonas sp. LB400Biphenyl Pathway
Pseudomonas sp. LB4004-Chlorobiphenyl Pathway
Pseudomonas sp. MA-1Pyridoxine Pathway
Pseudomonas sp. NCIB 10643Ethylbenzene Pathway
Pseudomonas sp. NCIB 9816-4Ethylbenzene Pathway
Pseudomonas sp. NCIB 9816-4Naphthalene Pathway
Pseudomonas sp. NCIB 9816/11Fluorene Pathway
Pseudomonas sp. NCIB G7Naphthalene Pathway
Pseudomonas sp. NRRLB-12227Atrazine Pathway
Pseudomonas sp. NRRLB-12228Atrazine Pathway
Pseudomonas sp. P-34Nicotine Pathway
Pseudomonas sp. P51Chlorobenzene Pathway
Pseudomonas sp. PEM12-Chloro-N-isopropylacetanilide Pathway
Pseudomonas sp. PF122-Mercaptobenzothiazole Pathway
Pseudomonas sp. PF42-Mercaptobenzothiazole Pathway
Pseudomonas sp. PJ 874Tyrosine Pathway
Pseudomonas sp. RHO1Chlorobenzene Pathway
Pseudomonas sp. s47p1Phenanthrene Pathway
Pseudomonas sp. s7k5Phenanthrene Pathway
Pseudomonas sp. TNT-32Trinitrotoluene Pathway
Pseudomonas sp. TNT-8Trinitrotoluene Pathway
Pseudomonas spp.Benomyl Pathway
Pseudomonas stutzeri AS39 Tetralin Pathway
Pseudomonas stutzeri KC Carbon Tetrachloride (anaerobic) Pathway
Pseudonocardia benzenivorans B5 1,4-Dioxane Pathway
Pseudonocardia dioxanivorans CB1190 1,4-Dioxane Pathway
Pseudonocardia sp. K1Tetrahydrofuran Pathway
Ralstonia eutropha Nitrophenol Family (an/aerobic) Pathway
Ralstonia eutropha 2,4-Dichlorophenoxyacetic Acid Pathway
Ralstonia eutropha A5 1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) Pathway
Ralstonia pickettii PKO1 N-Nitrosodimethylamine Pathway
Ralstonia pickettii TA Thioacetamide Pathway
Ralstonia pickettii TA Thiobenzamide Pathway
Ralstonia sp. M91-3Atrazine Pathway
Ralstonia sp. SLRS7 Imidosuccinate Pathway
Rhizobium huakuii Fosfomycin Pathway
Rhizobium sp. CU-A1Acenaphthylene Pathway
Rhodobacter sphaeroides Dimethyl Sulfoxide & Organosulfide Cycle Pathway
Rhodococcus corallinus NRRLB-15444R Atrazine Pathway
Rhodococcus erythropolis Endosulfan Pathway
Rhodococcus erythropolis 5D Dimethylisophthalate Pathway
Rhodococcus erythropolis AN-13 Nitrobenzene Pathway
Rhodococcus erythropolis DCL14 Limonene Pathway
Rhodococcus globerulus CL1 Cyclohexane Pathway
Rhodococcus jialingiae djl-6-2 Benomyl Pathway
Rhodococcus opacus Tetrahydrofuran Pathway
Rhodococcus opacus Acetylene Pathway
Rhodococcus rhodochrous Acetylene Pathway
Rhodococcus rhodochrous Bromoxynil (an/aerobic) Pathway
Rhodococcus rhodochrous Cyclopropanecarboxylate Pathway
Rhodococcus rhodochrous J1 Benzonitrile Pathway
Rhodococcus rhodochrous K22 Acrylonitrile Pathway
Rhodococcus rhodochrous NCIMB 13259 Styrene Pathway
Rhodococcus rhodochrous OBT18 2-Mercaptobenzothiazole Pathway
Rhodococcus ruber 1B Dimethylisophthalate Pathway
Rhodococcus sp.Thiophene-2-carboxylate Pathway
Rhodococcus sp.Acetylene Pathway
Rhodococcus sp.Methyl tert-butyl ether Pathway
Rhodococcus sp.Anthracene Pathway
Rhodococcus sp. 0246bMetamitron Pathway
Rhodococcus sp. IGTS8Dibenzothiophene Desulfurization Pathway
Rhodococcus sp. NI86/21Atrazine Pathway
Rhodococcus sp. strain WU-K2RBenzothiophene Desulfurization Pathway
Rhodococcus sp. strain YU6o-Xylene Pathway
Rhodococcus sp. strain YU6p-Xylene Pathway
Rhodococcus sp. TE1Atrazine Pathway
Rhodococcus spp.Caffeine Pathway
Rhodococcus TEI Carbofuran Pathway
Rhodopseudomonas palustris Benzoate (anaerobic) Pathway
Rhodotorula graminis Benzoate Pathway
Salmonella choleraesuis n-Octane Pathway
Salmonella choleraesuis 2,4,6-Trinitrotoluene (anaerobic) Pathway
Sarcina sp.Isoniazid Pathway
Sedimentibacter sp.beta-1,2,3,4,5,6-Hexachlorocyclohexane (an/aerobic) Pathway
Serratia marcescens Caffeine Pathway
Shewanella oneidensis Technetium Immobilization Pathway
Shewanella putrefaciens Technetium Immobilization Pathway
Sinorhizobium sp. KT55Benzothiophene Desulfurization Pathway
Sphingobium cloacae 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingobium yanoikuyae Benzo[a]pyrene Pathway
Sphingobium yanoikuyae FM-2 Bisphenol F Pathway
Sphingomonas haloaromaticamans 1,4-Dichlorobenzene Pathway
Sphingomonas paucimobilis EPA 505 Anthracene Pathway
Sphingomonas paucimobilis UT26 beta-1,2,3,4,5,6-Hexachlorocyclohexane (an/aerobic) Pathway
Sphingomonas paucimobilis UT26 gamma-1,2,3,4,5,6-Hexachlorocyclohexane Pathway
Sphingomonas sp.4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas sp.Carbofuran Pathway
Sphingomonas sp. A4Acenaphthylene Pathway
Sphingomonas sp. CB3Carbazole Pathway
Sphingomonas sp. HB-13-Fluorobenzoate Pathway
Sphingomonas sp. HH19kDibenzofuran Pathway
Sphingomonas sp. LB 126Anthracene Pathway
Sphingomonas sp. RW1Dibenzofuran Pathway
Sphingomonas sp. RW1Dibenzo-p-dioxin Pathway
Sphingomonas sp. SRS2Isoproturon Pathway
Sphingomonas TTNP3 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas wittichii RW1 Nitrofen Pathway
Sphingomonas xenophaga 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas xenophaga SKN Benzoate Pathway
Sphingomonas xenophagum 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas xenophagum 14677 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas xenophagum 6383 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas xenophagum 6985 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas xenophagum 8566 4-(1-Ethyl-1,4-dimethyl-pentyl)phenol Pathway
Sphingomonas yanoikuyae m-Xylene Pathway
Sphingopyxis macrogoltabida TFA Tetralin Pathway
Sporomusa ovata Tetrachloroethene (anaerobic) Pathway
Staphylococcus aureus Arsonoacetate Pathway
Staphylococcus auricularis DBF63 Fluorene Pathway
Staphylococcus auricularis DBF63 Dibenzofuran Pathway
Staphylococcus sp.Trinitrotoluene Pathway
Stenotrophomonas maltophilia Endosulfan Pathway
Stenotrophomonas maltophilia CSV89 1-Naphthoic Acid Pathway
Stenotrophomonas sp. RMSKAcenaphthylene Pathway
strain H45-2 Thiophene-2-carboxylate Pathway
Streptomyces flavovirens Phenanthrene Pathway
Streptomyces viridifaciens MG456-hF10 Valanimycin Synthesis Pathway
sulfate-reducing enrichment culture N47 2-Methylnaphthalene (anaerobic) Pathway
Sulfurospirillum barnesii SES-3 Selenate Pathway
Syncephalastrum racemosum UT-70 Phenanthrene (fungal 9R,10R) Pathway
Synechococcus sp.1,1,1-Trichloro-2,2-bis-(4'-chlorophenyl)ethane (DDT) (anaerobic) Pathway
Synechococcus sp. PR-6Phenanthrene Pathway
Terrabacter sp. DPO360Dibenzofuran Pathway
Tetrathiobacter mimigardefordensis 3,3'-Dithiodipropionate Pathway
Thauera aromatica Toluene (anaerobic) Pathway
Thauera aromatica K172 Benzoate (anaerobic) Pathway
Thauera aromatica K172 Phenol (anaerobic) Pathway
Thauera terpenica strain 21Mol Menthol (anaerobic) Pathway
Thielevia sp.2,4-Dinitrotoluene Pathway
Thiobacillus thioparus THI 115 Thiocyanate Pathway
Trametes versicolor Anthracene (fungal) Pathway
Trichodesmium erythraeum IMS101
 Starch Oligomer Pathway
Trichosporon cutaneum Nitrobenzene Pathway
Variovorax paradoxus JS171 3-Nitrotyrosine Family Pathway
Variovorax paradoxus T4 Dimethylisophthalate Pathway
Veillonella atypica Osmium Reduction Pathway
Vibrio sp. YC1Thiophene-2-carboxylate Pathway
Williopsis saturnus 1-Aminocyclopropane-1-carboxylate Pathway
Williopsis saturnus var. mrakii 2-Nitropropane Pathway
Xanthobacter autotrophicus GJ10 1,2-Dichloroethane Pathway
Xanthobacter flavus 14pl 1,4-Dichlorobenzene Pathway
Xanthobacter sp.Dimethylisophthalate Pathway
Xanthobacter sp. MAB22-Chloro-N-isopropylacetanilide Pathway
Xanthobacter sp. Py2Propylene Pathway
Xanthobacter sp. Py22-Nitropropane Pathway
Xanthobacter tagetidis Thiophene-2-carboxylate Pathway
Yarrowia lipolytica Limonene Pathway

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